3
marXperts
V6.0 - Aug 2014
Software Distribution Guide
4. Description of Programs
Name Docs Priority Description
Graphical user interfaces:
mar345dtb yes A GUI for data collection with mar345-scanner and dtb
mar345 yes A GUI for data collection with mar345-scanner without dtb
marstart - A Works together with program mar345dtb and mar345
margrabber yes A Shows crystal on screen as seen by TV-camera in dtb
marView yes A Standalone GUI for data display and inspection
automar yes D GUI for automar processing package (marProcess, marScale)
marmux yes D Stand-alone GUI to operate Xenocs GeniX X-ray generator
Hardware related programs:
mar345xf yes C Standalone transformation program for spiral images
marsim yes D Simulator for mar345 image plate scanner
dtbsim yes D Simulator for mardtb goniostat
marserver yes D TCP/IP-port multiplyer for mar345 scanner and mardtb
scan345 yes D Non-GUI data collection program for mar345scanner (not dtb)
modnb - D Modies header of calibration les
swapnb - D Swaps bytes in calibration le
dtbcmd - B Sends a native hardware command to the dtb controller
dtbstat - B Dumps status information of the dtb controller
dtbdata - B Dumps ionization chamber readings from motor scans of dtb
dtbmess - B Dumps native dtb controller messages
spiral(un)pack yes C (De-)compression of raw spiral images
Other programs:
catmar yes A Dumps headers of mar345/300 images and calibration les
marcvt yes A Non-GUI image format and manipulation tools (updated)
marcombine yes B Adds up images and produces o/p-le with combined intensities
marshrink yes C Shrinks mar345-formatted images (cut off outer resolution shells)
marheader - C Manipulates headers of mar345-formatted images
marstats yes C Dumps average intensity and sigmas of images
Data processing suite automar:
marPeaks yes C Spot search
marIndex yes C Autoindexing
marPredict yes C Pattern prediction
marStrategy yes C Calculates optimal data collection strategy
marSurvey yes C Calculates optimal data collection strategy (since end 2004)
marProcess yes C Integrates mar diffraction images
marPost yes C Postrenement and merging of partials
marScale yes C Scaling of reections
mar2mtz yes C Conversion of marPost/marScale output into mtz les
scalepackcvt yes C Conversion of scalepack output into SHELX les
Priority codes: A = Essential C = Not essential, may be removed
B = Helpful, installation recommended D = Needed only in special situations
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